Estimation of secondary household attack rates for emergent spike L452R SARS-CoV-2 variants detected by genomic surveillance at a community-based testing site in San Francisco.
Clin Infect Dis. 2021

Performance Characteristics of a Rapid SARS-CoV-2 Antigen Detection Assay at a Public Plaza Testing Site in San Francisco
J. of Infect. Disease, 2020

Rapid deployment of SARS-CoV-2 testing: The CLIAHUB
PLOS Pathogens, 2020

Community Transmission of Severe Acute Respiratory Syndrome Coronavirus 2 Disproportionately Affects the Latinx Population During Shelter-in-Place in San Francisco
Infectious Disease Society of America, 2020

IDseq-An open source cloud-based pipeline and analysis service for metagenomic pathogen detection and monitoring
Oxford Academic, 2020

Temporal airway microbiome changes related to ventilator associated pneumonia in children
European Respiratory Journal, 2020

ReScan, a Multiplex Diagnostic Pipeline, Pans Human Sera for SARS-CoV-2 Antigens
Cell Reports Medicine, 2020