 Detection of Pneumonia Pathogens from PlasmaCell-Free DNA American Journal of Respiratory Critical Care, 2020
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 Pan-viral serology implicates enteroviruses in acute flaccid myelitis Nature Medicine, 2020
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 Plasmodium falciparum Resistance to a Lead Benzoxaborole Due to Blocked Compound Activation and Altered Ubiquitination or Sumoylation American Society of Microbiology, 2020
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 Exploratory analysis of the potential for advanced diagnostic testing to reduce healthcare expenditures of patients hospitalized with meningitis or encephalitis PLoS One, 2020
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 Unbiased Metagenomic Sequencing for Pediatric Meningitis in Bangladesh Reveals Neuroinvasive Chikungunya Virus Outbreak and Other Unrealized Pathogens American Society of Microbiology, 2019
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 Exploratory proteomic analysis implicates thealternative complement cascade in primary CNSvasculitis Neurology, 2019
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 An exploration of ambigrammatic sequences in narnaviruses Scientific Reports, 2020
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|  We are pleased to release PRICE (Paired-Read Iterative Contig Extension), a de novo genome assembler implemented in C++. Its name describes the strategy that it implements for genome assembly: PRICE uses paired-read information to iteratively increase the size of pre-assembled contigs. It was designed to address the challenge of assembling viral genomes that constituted a small minority of the reads within ultra-deep, short-read, metagenomic, shotgun datasets. PRICE has already enabled the discovery of several novel virus genomes from such complex datasets.
The early online edition of the PRICE paper, published in G3, is here.Download PRICE |
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