 Extending chemical perturbations of the ubiquitin fitness landscape in a classroom setting reveals new constraints on sequence tolerance Biology Open, 2018
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 Whole-Genome mRNA Gene Expression Differs Between Patients With and Without Delirium Sage Journals, 2018
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 Avian keratin disorder of Alaska black-capped chickadees is associated with Poecivirus infection Virology Journal, 2018
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 Low-Cost Touchscreen Driven Programmable Dual Syringe Pump for Life Science Applications Science Direct, 2018
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 Metagenomic next-generation sequencing reveals Miamiensis avidus (Ciliophora: Scuticociliatida) in the 2017 epizootic of leopard sharks (Triakis semifasciata) in San Francisco Bay, California BioRxiv, 2018
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 Chronic Meningitis Investigated via Metagenomic Next-Generation Sequencing JAMA Network, 2018
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 Metagenomic Sequencing Detects Respiratory Pathogens in Hematopoietic Cellular Transplant Patients American Journal of Respiratory and Critical Care Medicine, 2018
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|  We are pleased to release PRICE (Paired-Read Iterative Contig Extension), a de novo genome assembler implemented in C++. Its name describes the strategy that it implements for genome assembly: PRICE uses paired-read information to iteratively increase the size of pre-assembled contigs. It was designed to address the challenge of assembling viral genomes that constituted a small minority of the reads within ultra-deep, short-read, metagenomic, shotgun datasets. PRICE has already enabled the discovery of several novel virus genomes from such complex datasets.
The early online edition of the PRICE paper, published in G3, is here.Download PRICE |
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