 A Novel Cause of Chronic Viral Meningoencephalitis: Cache Valley Virus Annals of Neurology, 2017
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 Zika virus cell tropism in the developing human brain and inhibition by azithromycin PNAS, 2017
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 Plasmid-free CRISPR/Cas9 genome editing in Plasmodium falciparum confirms mutations conferring resistance to the dihydroisoquinolone clinical candidate SJ733 PLoS One, 2017
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 Metagenomic DNA Sequencing for the Diagnosis of Intraocular Infections American Academy of Ophthamology, 2017
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 Differential disease susceptibility in experimentally reptarenavirus infected boa constrictors and ball pythons Journal of Virology, 2017
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 A Herpesviral induction of RAE-1 NKG2D ligand expression occurs through release of HDAC mediated repression eLIFE, 2016
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 Illuminating uveitis: metagenomic deep sequencing identifies common and rare pathogens Genome Medicine, 2016
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|  We are pleased to release PRICE (Paired-Read Iterative Contig Extension), a de novo genome assembler implemented in C++. Its name describes the strategy that it implements for genome assembly: PRICE uses paired-read information to iteratively increase the size of pre-assembled contigs. It was designed to address the challenge of assembling viral genomes that constituted a small minority of the reads within ultra-deep, short-read, metagenomic, shotgun datasets. PRICE has already enabled the discovery of several novel virus genomes from such complex datasets.
The early online edition of the PRICE paper, published in G3, is here.Download PRICE |
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